C57BL/ 6N-Tg(1. 28HBV) / Vst 乙肝病毒转基因小鼠的转录组学分析
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1. 上海中医药大学附属曙光医院肝病研究所,上海 201203;2. 上海市中医临床重点实验室,上海 201203;3. 肝肾疾病病证教育部重点实验室,上海 201203

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Transcriptomic analysis of C57BL / 6N-Tg(1. 28HBV) / Vst hepatitis B virus transgenic mice
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1.Institute of Liver Diseases, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China. 2.Shanghai Key Laboratory of Traditional Chinese Clinical Medicine, Shanghai 201203. 3.Key Laboratory of Liver and Kidney Diseases, Ministry of Education, Shanghai 201203

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    摘要:

    目的 观察C57BL/6N-Tg (1.28HBV) / Vst 乙型肝炎病毒(hepatitis B virus,HBV)转基因(HBV-Tg)小鼠模型的特征,并分析HBV-Tg 小鼠模型的转录组学特点。 方法 以10 只雄性HBV-Tg 小鼠为实验组,10 只野生型小鼠为对照组。以血清HBV DNA、HBsAg、HBeAg 水平和肝组织HBsAg、HBcAg 表达情况评价模型小鼠病毒学特征,检测血清ALT、AST,肝组织HE、天狼猩红染色及肝组织Hyp 含量评估小鼠肝脏炎症及纤维化程度。两组各随机选择3 例肝组织样本提取RNA 进行高通量转录组测序。经R 软件分析获得表达显著的差异基因,经GO 和KEGG 分析获得差异基因功能富集情况,再采用实时荧光定量PCR(RT-qPCR)对差异显著的基因进行验证。 结果 与正常组相比,模型组ALT、AST 水平均有所升高,以ALT 更为显著(P< 0. 05);模型组肝组织HE 染色可见肝细胞核增大,个别肝细胞出现肿胀。天狼猩红染色结果显示,HBV 转基因组汇管区及小叶间出现少量胶原沉积,呈细线状。通过筛选条件( |logFC| > 2 倍且P.adj < 0. 05)获得差异基因共计1352 个,其中上调基因703 个,下调基因649个。KEGG 分析提示差异基因主要在PPAR 信号通路、视黄醇代谢、脂肪酸降解等通路中富集(P.adj < 0. 05)。明显上调的差异基因主要有Cyp4a10、Cyp4a14、Acot1、Acot3、Ehhadh 等,明显下调基因包括Scn5a、Apol10b、Igddc4、Cxcl1、9530077C05Rik 等,经RT-qPCR 验证趋势一致(P< 0. 05)。 结论 HBV-Tg 小鼠具有自发纤维化的趋势,经转录组学分析,慢性乙型病毒性肝炎(chronic hepatits B, CHB)发生的潜在机制主要涉及PPAR 信号通路、视黄醇代谢、脂肪酸降解、药物代谢等通路。

    Abstract:

    Objective To observe the characteristics of C57BL/6N-Tg (1. 28HBV) / Vst transgenic hepatitis B virus (HBV-Tg) model mice and analyze their transcriptomic characteristics. Methods Twenty male HBV-Tg mice were divided into an experimental group and a wild-type ( control) group ( n= 10 mice per group). The virological characteristics of the model mice were evaluated according to serum levels of HBV DNA, HBsAg, and HBeAg, and expression levels of HBsAg and HBcAg in liver tissue. Serum levels of alanine transaminase ( ALT) and aspartate transaminase (AST), hematoxylin and eosin (HE) and Sirius red staining, and hydroxyproline(Hyp) in liver tissue were detected to evaluate the degree of liver inflammation and fibrosis. Liver tissue samples were randomly selected from three mice in each group for RNA extraction for high-throughput transcriptome sequencing. Significantly differentially expressed genes were identified using R software. Functional enrichment of differential genes was determined by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, and genes with significant differences were verified by real-time fluorescence quantitative polymerase chain reaction (RT-qPCR). Results ALT and AST levels were increased in the model group compared with the normal group, with the result for ALT being more significant (P< 0. 05). HE staining of liver tissue showed enlargement of the liver nucleus and swelling of some hepatocytes in the model group, while Sirius red staining showed a small amount of collagen deposition in the sink area and interlobule in the HBV transgenic group, in the shape of thin lines. A total of 1352 differential genes were obtained by screening ( | logFC | > 2 and P.adj < 0. 05), including 703 up-regulated and 649 down-regulated genes. KEGG analysis suggested that differential genes were mainly enriched in the peroxisome proliferator-activated receptor ( PPAR) signaling pathway, retinol metabolism, fatty acid degradation, and other pathways (P.adj < 0. 05). The main significantly up-regulated genes included Cyp4a10, Cyp4a14, Acot1, Acot3, and Ehhadh, and the significantly down-regulated genes included Scn5a、Apol10b、Igddc4、Cxcl1、9530077C05Rik. The trend was consistent after RT-qPCR detection (P< 0. 05). Conclusions HBV-Tg mice have a tendency to develop spontaneous fibrosis. Transcriptomic analysis showed that chronic hepatitis B mainly involves PPAR signaling, retinol metabolism, fatty acid degradation, drug metabolism, and other pathways.

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李容容,孙鑫,黄恺,赵志敏,彭渊,刘成海. C57BL/ 6N-Tg(1. 28HBV) / Vst 乙肝病毒转基因小鼠的转录组学分析[J].中国实验动物学报,2023,31(12):1519~1529.

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  • 收稿日期:2023-08-08
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  • 在线发布日期: 2024-01-25
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