抗阻运动对SAMP8小鼠骨骼肌lncRNA和mRNA基因表达谱的影响
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1.成都体育学院;2.贵阳市白云区第三中学

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国家自然科学基金项目(面上项目,重点项目,重大项目),四川省中央引导地方科技发展项目,四川省自然科学基金,四川省科技创新创业苗子工程项目


Effects of resistance exercise on lncRNA and mRNA gene expression profiles of SAMP8 mice skeletal muscle
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Chengdu Sport University

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The National Natural Science Foundation of China (General Program, Key Program, Major Research Plan),Sichuan Province central government guides local science and technology development project,Sichuan Natural Science Foundation,Sichuan Province science and technology innovation and entrepreneurship seedling project

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    摘要:

    【摘要】目的 利用RNA-seq技术比较运动组与对照组小鼠股四头肌中差异表达的lncRNA和mRNA,探讨抗阻运动作用于SAMP8小鼠(senescence accelerated-prone mouse)的潜在调控机制。方法: 12只28周龄雄性SAMP8快速衰老小鼠分为模型组(M组)、抗阻运动组(R组),每组6只;另设6只同龄SAMR1抗衰老小鼠(senescence accelerated resistant mouse)作对照组(C组)。抗阻运动组经递增负重爬梯运动训练8周。每一周测定相对抓力、每两周测转棒测试时间。取材后取右侧股四头肌进行 HE染色观察其组织学变化;并取左侧股四头肌进行RNA-seq(RNA-sequencing),筛选出差异表达的lncRNA(long non-coding RNA, lncRNA)和mRNA,然后对这些基因进行基因本体(Gene Ontology, GO)和京都基因和基因组百科全书(Kyoto Encyclopedia of Genes and Genomes, KEGG)富集分析。最后通过定量逆转录聚合酶链反应(quantitative real-time polymerase chain reaction, qRT-PCR)对关键性差异表达基因进行定量分析以验证RNA-seq结果的准确性。结果:(1)干预前,SAMP8小鼠相比较于自然衰老的SAMR1小鼠表现出相对抓力以及加速转棒测试时长显著下降(P<0.01);干预后,与M组相比,R组相对抓力以及转棒时长均出现显著增加(P<0.01)。(2) HE染色结果显示,M组肌纤维横截面积与C组比较显著下降(P<0.01);R组肌纤维横截面积与M组比较显著增加(P<0.01)。(3)通过差异表达分析,相比于M组,R组有182个表达水平上调和218个表达下调的lncRNAs以及454个表达上调和289个表达下调的mRNAs。R组与M组之间差异lncRNA的靶基因的KEGG显著富集的通路有产生IgA的肠道免疫网络、NF-kappa B、炎症性肠病等信号通路。结论:(1) 本研究证明了抗阻运动能够改善SAMP8小鼠肌少症的骨骼肌机能,利用RNA-seq 分别鉴定出M组、R组小鼠的差异 lncRNAs和mRNAs。这些差异基因可能是肌少症的潜在治疗靶点。(2)通过分析差异表达lncRNAs的靶基因以及mRNAs的生物学信息,从而为进一步了解抗阻运动改善肌少症的机制提供了可能。

    Abstract:

    【Abstract】Objective To explore the potential regulatory mechanism of resistance exercise on senescence accelerated-prone mouse (SAMP8) by comparing the differential expression of lncRNA and mRNA in quadriceps between exercise group and control group by RNA-seq technology. Methods: Twenty-eight-week-old male SAMP8 mice were divided into a model group and resistance exercise group, with six mice in each group. Another eight SAMR1 mice of the same age were used as the control group. The resistance exercise group received 8 weeks of increasing weight climbing exercise training. The relative grip strength was performed every 1 weeks and the rotarod test was performed every 2 weeks. Hematoxylin-eosin staining was used to observe the histological changes of the right quadriceps femoris, and take the left quadriceps for RNA-seq (RNA-sequencing). The differentially expressed long non-coding RNA (lncRNA) and mRNA were screened. These Genes were then analyzed for enrichment by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Finally, the key differentially expressed genes were analyzed by quantitative reverse transcription polymerase chain reaction (qRT-PCR) to verify the accuracy of RNA-seq results. Results: (1) Compared with the control group, the relative grip strength and rotarod test time of model group were decreased significantly(P < 0.01). After 8 weeks of resistance exercise, compared with model group, the relative grasping strength and the rotarod test time of resistance exercise groups were increased significantly(P < 0.01). (2) The results of Hematoxylin-eosin staining showed that compared with the C group, the cross-sectional area of muscle fibers in M group was significantly lower(P < 0.01), compared with the M group, the cross-sectional area of muscle fibers in R group was significantly increased (P < 0.01). (3) Through differential expression analysis, we found 182 upregulated and 218 downregulated lncRNAs, and 454 upregulated and 289 downregulated mRNAs in the comparison between the M group and the R group. The KEGG pathways of lncRNA target genes between the M group and the R group were significantly enriched in Intestinal immune network for IgA production、NF-kappa B signaling pathway、inflammatory bowel disease, etc. Conclusions: (1) This study demonstrated that resistance exercise can improve skeletal muscle function in SAMP8 mice with sarcopenia, and evaluated the differentially expressed lncRNA and mRNA in M group and R group by RNA-seq. These genes may be the target of sarcopenia therapy. (2) By analyzing the biological information of the target genes of differentially expressed lncRNAs and mRNAs, it is possible to further understand the mechanism of resistance exercise to improve sarcopenia.

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  • 收稿日期:2023-10-13
  • 最后修改日期:2024-01-15
  • 录用日期:2024-01-15
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