基于网络药理学、分子对接与实验验证探讨熊果酸治疗矽肺纤维化的作用机制
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宁夏医科大学

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国家自然科学基金资助项目(No 82260142、82360639);宁夏自然科学(2022AAC03128、2024AAC03239);中科院西部青年学者项目资助;宁夏回族自治区青年拔尖人才培养项目


Exploring the Mechanism of Ursolic Acid in the Treatment of Silicosis Fibrosis Based on Network Pharmacology, Molecular Docking, and Experimental Validation
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Ningxia Medical University

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This work was supported by the National Natural Science Foundation of China (No. 82260142, 82360639), the Natural Science Foundation of Ningxia (2022AAC03128, 2024AAC03239), the Western Young Scholar Project of the Chinese Academy of Sciences, and the Young Elite Talent Cultivation Project of Ningxia Hui Autonomous Region.

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    摘要:

    【摘要】目的 基于网络药理学、分子对接及体外实验探究熊果酸抗矽肺纤维化的作用机制。方法 通过GeneCards、PubChem等数据库获取熊果酸作用靶点;检索疾病相关数据库(GeneCards、OMIM)获得矽肺纤维化及上皮间质转化(EMT)相关靶点。利用微生信平台筛选交集靶点,通过String数据库和Cytoscape构建蛋白互作网络,筛选核心靶点;采用David数据库进行GO和KEGG富集分析;运用AutoDock进行分子对接验证。通过beas-2B细胞实验验证关键靶点。结果 获得熊果酸作用靶点179个,矽肺纤维化及EMT相关靶点分别为8023和6809个,交集靶点133个。筛选出Akt1、STAT3、MMP9等9个核心靶点,其中MMP9和Akt1在PPI网络中具有最高连接度。分子对接显示熊果酸与MMP9(结合能-8.4 kJ/mol)、Akt1(结合能-7.9 kJ/mol)具有强结合活性。KEGG分析提示PI3K-Akt信号通路为关键调控通路。体外实验表明:熊果酸显著抑制SiO2诱导的细胞活力下降(CCK8);降低p-Akt表达(Western blot);下调纤维化标志物α-SMA和间质标志Vimentin表达,同时上调上皮标志E-cadherin表达(免疫荧光/Western blot)。结论 熊果酸可能通过抑制Akt磷酸化及MMP9表达,调控EMT进程,从而发挥抗矽肺纤维化作用。 【关键词】熊果酸;矽肺纤维化;PI3K/Akt信号通路;上皮间质转化;分子对接

    Abstract:

    【Abstract】Objective To explore the mechanism of ursolic acid against silicosis fibrosis based on network pharmacology, molecular docking and in vitro experiments. Methods The ursolic acid targets were obtained from GeneCards, PubChem and other databases. Disease-related databases (GeneCards, OMIM) were searched for targets related to silicosis fibrosis and epithelial-mesenchymal transition (EMT). The micro-biotech platform was used to screen the intersecting targets, and the protein-protein interaction network was constructed through the String database and Cytoscape to screen the core targets. David database was used for GO and KEGG enrichment analysis. Use AutoDock for molecular docking validation. Validation of key targets by beas-2B cell experiments. Results A total of 179 ursolic acid targets, 8023 and 6809 silicosis fibrosis and EMT-related targets, and 133 intersecting targets were obtained. Nine core targets, including Akt1, STAT3 and MMP9, were screened out, among which MMP9 and Akt1 had the highest connectivity in the PPI network. Molecular docking showed that ursolic acid had strong binding activity with MMP9 (binding energy -8.4 kJ/mol) and Akt1 (binding energy -7.9 kJ/mol). KEGG analysis suggested that the PI3K-Akt signaling pathway was a key regulatory pathway. In vitro experiments showed that ursolic acid significantly inhibited the decrease in cell viability induced by SiO2 (CCK8). Decreased p-Akt expression (Western blot); The expression of the fibrosis marker α-SMA and the interstitial marker Vimentin was down-regulated, while the expression of the epithelial marker E-cadherin (immunofluorescence/Western blot) was up-regulated. Conclusion Ursolic acid may play an anti-silicosis fibrosis role by inhibiting Akt phosphorylation and MMP9 expression and regulating the process of EMT. 【Keywords】ursolic acid; silicosis fibrosis; PI3K/Akt signaling pathway; epithelial-mesenchymal transition; Molecular docking

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  • 收稿日期:2025-03-25
  • 最后修改日期:2025-06-30
  • 录用日期:2025-07-22
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